Balancing performance trade-offs on long-tailed data distributions remains a long-standing challenge in visual recognition. Existing methods mainly improve tail classes through re-balancing, representation learning, or data augmentation, but the underlying cause of tail class degradation is still insufficiently explored. In this paper, we find that standard long-tailed training induces background-biased representation and optimization: tail classes suffer larger background distribution shifts and become increasingly driven by background gradients. This reveals that tail degradation is not merely caused by insufficient samples, but also by the learning of irrelevant background features. To tackle this issue, we propose Object-Focused Background Debiasing (OFBD), a framework that mitigates background bias from both distribution and optimization perspectives. Specifically, Foreground-guided CutMix preserves target-related foregrounds while diversifying complementary backgrounds, and Background-guided Feature Rectification suppresses background-biased features without learnable parameters or additional training. Extensive experiments show that our method improves overall accuracy, achieves significant tail-class gains, and can serve as a plug-in for mainstream long-tailed methods without external data or pretrained recognition models. The code is available at: this https URL
https://arxiv.org/abs/2609.37331
Multimodal large language models (MLLMs) have shown strong potential for universal multimodal representation learning. However, existing methods either compress each input into a single vector, limiting fine-grained expressiveness, or retain long sequences of visual-token vectors, incurring substantial storage and interaction costs. To resolve this trade-off, we propose ResComEmb, a trainable framework for effective and efficient universal multi-vector multimodal embedding. ResComEmb first encodes each input at native dynamic resolution into ordered global, intermediate, and fine-grained views. After MLLM contextualization and embedding projection, a trainable Residual Homogeneity Compression (RHC) module reduces within-granularity redundancy and cross-granularity repetition under explicit visual token budgets. Then, ResComEmb introduces a length-adaptive Bidirectional Late-Interaction Matching mechanism for robust query-document scoring, which averages the strongest token-level matches in each direction and combines the two scores using a weight based on how many valid tokens each side has. Extensive experiments on MMEB, ViDoRe V1, and ViDoRe V2 show that ResComEmb produces higher-quality universal multimodal embeddings than VLM2Vec-V2, and outperforms ColQwen2.5 in visual document retrieval using only 37.5% of its full visual token budget, demonstrating a favorable effectiveness-efficiency trade-off.
https://arxiv.org/abs/2609.37225
We study the problem of recovering the governing ODE of a dynamical system from unstructured, high-dimensional observations such as images. Existing methods for ODE discovery typically assume direct measurements of the variables, or do not provide theoretical guarantees on the learned variables and equations. While Causal Representation Learning (CRL) methods provide guarantees on identifying variables from high-dimensional observations up to component-wise diffeomorphisms, we show that in general these variables cannot be used directly as input to equation discovery methods, which typically assume that the variables will lead to sparse equations. So we introduce SParse Equivalent Equation Discovery AutoEncoder (SPEED-AE), a framework that combines a pretrained CRL method with a component-wise autoencoder that learns transformations of variables that are amenable to sparse ODE discovery. We show that for polynomial ODEs, this additional step allows us to restrict the identifiability of each variable from polynomial to monomial diffeomorphisms. Experiments on Lotka-Volterra, Lorenz, and a two-pendulum system show that SPEED-AE improves on the disentanglement of the CRL methods and that it recovers ODEs that are closest to the ground truth, while achieving state-of-the-art forecasting performance.
https://arxiv.org/abs/2609.37083
Incomplete multi-view clustering (IMVC) is typically evaluated by retraining separate models under different missing-view configurations. Evaluations indexed only by nominal missing rate can overlook differences in observation structure across missing-view protocols. We show that missing-data protocols with identical nominal missing rates can induce substantially different learning regimes, differing by approximately 50-fold in the proportion of fully observed samples. We formalize this phenomenon as protocol divergence, which quantifies structural disparities among missing-view protocols beyond marginal missing rates. Furthermore, we analyze support-gated reconstruction mechanisms and show that their optimization contribution is inherently limited by the frequency of eligible observations under explicit normalization and optimization conditions. Based on these observations, we propose CRAFT (Co-occurrence-free Robust Attention-masked Fusion Transformer), a train-once framework that combines representation learning with an architecture designed to process missing-view inputs. CRAFT combines (i) per-sample forward computation using each sample's observed views and shared parameters, and (ii) mask-aware fusion over nonempty observed-view subsets. The deployment evaluation starts from training data with all views available and reuses one final checkpoint per dataset and seed across missing-view protocols without retraining. Experiments on CUB and MultiFashion show that CRAFT achieves the strongest performance in 12 out of 13 information-matched settings. Additional deployment experiments across seven benchmarks and sixteen missing configurations demonstrate substantial computational savings through checkpoint reuse while maintaining competitive clustering performance. Code and evaluation tools: this https URL and this https URL.
https://arxiv.org/abs/2606.04857
The central challenge of world modeling is to learn representations that capture how the world evolves. However, existing world models predominantly represent future states without explicitly capturing the latent causes underlying their evolution, limiting their ability to reason about why and how the world changes. To address this limitation, we propose Abductive World Modeling (AWM), a framework that learns structured causal representations by abductively inferring latent causes from predicted futures. Specifically, we realize AWM through the Hierarchical Abductive State Pyramid (HASP), which organizes the inferred world state into three complementary components - Entity, Dynamic, and Relation - capturing what exists, how it changes, and how entities interact, respectively. By jointly reasoning over the current observation and its predicted future, HASP abductively infers these latent factors and integrates them into a structured state representation for downstream reasoning. To the best of our knowledge, AWM is the first framework to introduce abductive state inference into latent-space world modeling for learning structured representations of world dynamics. Experiments across physical prediction, causal reasoning, and action understanding demonstrate the effectiveness of our approach. Compared with V-JEPA, a state-of-the-art latent-space world model, AWM improves physical prediction AUROC by 10.7%, causal reasoning accuracy by 16.8%, and action Top-1 accuracy by 68.0%.
https://arxiv.org/abs/2609.36985
Dexterous manipulation requires tactile feedback. However, robot tactile demonstrations are difficult to scale,because dexterous-hand teleoperation provides limited tactile feedback to the operator. In contrast, human demonstrations offer a substantially more scalable source of diverse tactile interactions. Motivated by a simple premise: hands can change, but the underlying physics of interaction does not. We leverage human tactile data to improve dexterous manipulation policies. Specifically, we first build a tactile motion-capture system that synchronously records images, tactile signals, and hand motions. Using this system, we construct the UVTA dataset spanning five contact-rich tasks, with 1,000 human demonstrations covering diverse interaction patterns and 150 robot demonstrations per task. To transfer the underlying physics of human interaction to robot control, we propose a Unified Visual-Tactile-Action Model that maps both embodiments into aligned tactile and action representations and jointly predicts future action and tactile trajectories. The joint objective enables human demonstrations to supervise contact-aware representation learning, while only robot actions are executed during deployment. In real-robot evaluations across five tasks, our method achieves an average success rate of 70%, outperforming the strongest visual-tactile baseline, which achieves 29%, and an architecture ablation, which achieves 42%. Performance improves consistently with additional human demonstrations and exhibits no saturation at 1,000 demonstrations per task, validating the effectiveness of scalable human tactile data for dexterous manipulation. Project page is available at this https URL.
https://arxiv.org/abs/2609.34182
Object re-identification (ReID) faces a recurring challenge: different identities can share highly similar global appearances, while the cues that distinguish them are localized, heterogeneous, and visible only under particular viewpoints. This challenge arises in animal ReID through markings, contours, and scars, in person ReID through subtle clothing and accessory cues, and in vehicle ReID through localized appearance details. Although visual foundation models encode such information in dense tokens, a single holistic descriptor can obscure discriminative local signals. We propose FM-ReID, an end-to-end framework that formulates local representation learning as selective competitive token routing. Its Competitive Fine-grained Mining module uses multiple mining queries and a residual query to compete for dense DINOv3 tokens. Above-prior selection retains tokens preferentially allocated to each mining query, while the residual slot receives tokens excluded from the retrieval descriptors. The resulting multi-query descriptors are jointly trained with a holistic representation for retrieval, without fixed spatial partitions or equal-area constraints. FM-ReID achieves strong results on animal, person, and vehicle ReID benchmarks, supporting competitive token routing as an effective way to augment holistic foundation-model representations.
https://arxiv.org/abs/2609.36560
Partial observability remains a fundamental challenge in robotic navigation, where limited sensor coverage and occlusions leave large portions of the environment unobserved. Existing scene completion methods primarily focus on improving incomplete mapping or reconstructing partially observed 3D structures, but rarely investigate how scene completion can be designed to benefit downstream tasks such as path planning. In this work, we propose a path-planning-oriented 3D scene completion framework that moves beyond pure occupancy modeling toward a coupled geometric formulation. Specifically, given partial LiDAR observations as input, the proposed framework jointly predicts completed Truncated Unsigned Distance Field (TUDF)-based continuous geometric representations and voxel-wise occupancy maps. This coupled representation allows the network to better reason about obstacle boundaries and free-space geometry. To fully exploit the synergy between the two representations, we introduce a bidirectionally coupled learning scheme, where TUDF features provide dense geometric guidance to improve occupancy reconstruction, while occupancy features in turn offer complementary structural constraints that refine distance-field estimation. Consequently, the proposed network directly predicts complete occupancy and TUDF representations, allowing seamless integration of TUDF into trajectory planning without post-processing. Extensive experiments on unseen environments demonstrate that the proposed method consistently improves both geometric reconstruction quality and downstream planning performance.
https://arxiv.org/abs/2609.36543
Relational in-context learning (ICL) conditions predictions on the labeled support examples and their linked tables, creating a failure mode when the support set contains target-derived features that are unavailable for the query. We formulate this problem as support-set target leakage, distinct from leakage during dataset construction, temporal splitting, or representation learning. Here, the target-derived (leaker) columns are present only in the labeled support set during relational in-context inference, while queries remain clean. We construct 14 synthetic leaker types, corresponding to 20 columns, spanning proxies with different noise levels, coverage, modalities, semantic transparency, and relational distances. We evaluate a frozen relational encoder with an ICL head on held-out RelBench databases and use Integrated Gradients (IG) to rank and remove suspicious columns. Our results show that the effect of support-set leakage varies across tasks and relational distances. Target-table leakers cause the clearest degradation, while one- and two-hop leakers are not consistently used by the model. IG ranks target-table leakers highly across datasets and partially recovers performance in settings where leakage has the largest effect.
https://arxiv.org/abs/2609.36384
Generative and representation learning remain asymmetrically connected: semantic representations are used to improve diffusion generation, whereas the models' own representations are often treated as a by-product of synthesis. We ask whether diffusion models can instead be trained to learn substantially stronger semantic representations without sacrificing generation quality. SelfFlow takes a step in this direction by introducing self-supervised patch alignment into flow matching, but its main gains remain in faster convergence and improved generation. Inspired by DINO and iBOT, we extend this framework with cross-view class-token alignment to further strengthen semantic representations. Specifically, we form two independently noised, dual-timestep observations of each image and align each student class-token representation with the stop-gradient EMA-teacher target from the other observation. This objective is optimized jointly with the inherited flow-matching and local patch objectives. Notably, although the additional objective acts only on the class token, it strengthens both class-token and patch representations. Compared with a matched two-view baseline, ImageNet linear-probing accuracy improves by 9.4\% using the class token and 10.1\% using mean-pooled patch tokens, while frozen-backbone VOC2012 segmentation improves by 3.6 mIoU. These representation gains are achieved while maintaining comparable ImageNet generation FID. In text-to-image training, the same objective also improves generation FID, reducing it from 2.52 to 2.37 at matched checkpoints. Our results show that representation need not remain a by-product of generation or merely a tool for improving it: it can be directly optimized as a first-class capability of diffusion pretraining alongside generation.
https://arxiv.org/abs/2609.36348
Existing protein geometry models typically represent molecular surfaces using local geometric features such as sampled points, normals, and curvature. While effective for capturing exposed molecular shape, these representations do not explicitly model the volumetric organization beneath the surface or provide a consistent coordinate system for residue-wise volumetric structure. We introduce Protein-TetSphere, a registered residue-wise volumetric representation for proteins. Each protein chain is tetrahedralized to obtain local volumetric regions associated with individual residues, which are then registered to a shared fixed-topology tetrahedral reference and represented in a common Laplacian basis. This registration establishes consistent volumetric coordinates across residues, enabling local three-dimensional deformation to be integrated with surface and chemical information in a multimodal protein representation. We evaluate Protein-TetSphere on ligand-binding pocket classification, protein--protein interface prediction, and de novo protein binder design. Across the three tasks, Protein-TetSphere improves ligand-binding pocket balanced accuracy from $0.795$ to $0.826$, Pinder-Pair/Site AUROC from $0.914/0.852$ to $0.932/0.866$, and binder-design success from $14.95\%$ to $19.90\%$ on the BoltzGen Challenge Set and from $27.62\%$ to $32.19\%$ at the ProtDBench backbone level. These results show that registered volumetric geometry provides complementary spatial information beyond molecular surfaces across protein recognition, interaction, and design.
https://arxiv.org/abs/2609.36277
Recent fMRI foundation models differ substantially in the spatial scale at which they represent brain activity. ROI- and connectivity-based models are efficient but coarse, whereas voxel-level models preserve fine-grained spatial structure but require specialized 3D/4D architectures and costly fMRI-specific pretraining. We ask how effectively an image-pretrained encoder can reuse the spatial organization of cortical activity. Motivated by evidence that macroscale brain activity is strongly constrained by brain geometry, we introduce FlatClip, a frozen-encoder surface-level baseline that renders cortical activity as geometry-aware flatmap sequences and reuses a frozen SigLIP2 image encoder with only a lightweight downstream probe. Across resting-state benchmarks, FlatClip serves as a competitive middle-ground representation, outperforming ROI-level baselines on HCP and ADNI tasks while remaining weaker on PPMI and below the strongest voxel-level models overall. On visual-fMRI decoding, restricting the input to visual or NSD-provided task-active cortex improves performance, highlighting the value of task-relevant cortical coverage. Spatial perturbation controls reduce the predictive performance of flatmap features under both retrained and fixed readouts, and anatomy-linked arrangements consistently outperform vertex permutations across three colormaps. Together, these results position surface-level flatmap sequences as a practical middle-ground baseline between ROI and voxel models, and support the utility of anatomy-linked spatial organization for reusing image-pretrained features. Code is available at this https URL.
https://arxiv.org/abs/2609.31204
Scaling studies typically represent training data by a single count of samples. For hierarchically and spatially structured data, however, the same number of samples can be drawn from few or many sources and distributed differently across the underlying domain. We therefore study data scaling as an allocation problem, separating unique sample count, source diversity, and spatial coverage. We study this decomposition in microscopic whole-brain histology, where a source is an individual brain, and a sample is an image patch at a specific spatial location. Across 93 controlled pretraining runs of a contrastive model that uses spatial proximity for supervision, we vary data allocation, compute, and model capacity over 11.6 million spatially anchored image patches from 21 human brains. Performance improves with more unique samples, broader spatial coverage, additional compute, and larger model capacity. At fixed sample count, distributing samples across one to 18 subjects produces no detectable improvement, even though representations generalize substantially better to subjects encountered during pretraining. Inter-subject variation therefore strongly affects generalization, but additional subjects provide no benefit when a fixed sample budget is distributed across more sources. These results establish sample count, source diversity, and spatial coverage as distinct axes of data scaling in spatially structured representation learning.
https://arxiv.org/abs/2609.31201
Vessel segmentation in medical images is essential for many clinical tasks, ranging from diagnosis to treatment planning. However, it remains challenging due to complex vascular morphology and diverse imaging conditions. Existing deep learning methods rarely aim at building a generalizable vessel segmentor across anatomies and modalities. While the Seg- ment Anything Model (SAM) has shown promise for med- ical image segmentation, its original design does not fully exploit vascular morphology and struggles with fine-grained vascular structures, leading to suboptimal performance. In this paper, we propose ReG-SAM, a SAM-based framework tailored to 2D vessel segmentation that leverages reference graph set for enhancing vascular representations. Specifically, we introduce two modality-aware representations derived from the reference masks: graph prompt embeddings (GPEs) that encode global spatial features from graphs, and vascu- lar prototype embeddings (VPEs) that capture fine-grained modality-specific vessel characteristics from multi-scale fea- ture maps and vascular masks. Since both require vascular masks that are unavailable during inference and require robust modality-aware vascular feature representations, we construct a modality-wise vascular database and develop two reference graph-guided representation learning schemes for estimating GPEs and VPEs using samples from the database rather than ground-truth masks. Extensive experiments across 19 datasets demonstrate that ReG-SAM consistently outperforms existing baselines, even those using manual prompts, particularly on challenging thin vessels.
https://arxiv.org/abs/2609.31160
Contact-rich assembly tasks such as peg-in-hole insertion remain difficult to learn from limited demonstrations. While retrieval-augmented imitation learning, which augments target demonstrations with relevant prior data, offers a promising direction, its applicability to contact-rich manipulation remains largely unexplored. Contact-rich insertion unfolds over multiple phases from search to insert, and retrieving phase-specific experience from prior data in principled ways remains an open question. Our key insight is that a compliant wrist enables the robot to sustain contact throughout execution, producing rich tactile and force signals that naturally reveal the phase structure of insertion and inform what should be retrieved. Based on this insight, we present PHASE (PHase-Aware Segmentation and REtrieval), a framework for compliance-enabled tactile phase retrieval that integrates multimodal contact-aware representation learning, variable-length phase segmentation from tactile signals, and phase-consistent retrieval for policy learning. We evaluate PHASE on real-world peg-in-hole insertion across five peg geometries, comparing against retrieval strategies drawn from state-of-the-art methods under a shared policy architecture. PHASE improves the overall success rate by 13 percentage points over the strongest non-phase-aware baseline, and improves performance under unseen initial positions by 30 percentage points. These results demonstrate that aligning retrieval with interaction-defined contact phases substantially improves robustness in few-shot insertion learning.
https://arxiv.org/abs/2609.30889
Learned robot policies produce actions, but their outputs alone do not establish whether execution is progressing as intended. Robot execution monitoring requires identifying the current execution phase, detecting failures, and recognizing task completion from observations available during execution. Training such monitors requires annotations that are scarce in datasets collected for robot-policy learning. We present RoboMonitor, a label-efficient vision--language execution monitor that learns from these datasets before introducing monitoring supervision. We pre-train on 25 hours of multi-camera trajectories spanning 12 manipulation tasks and two robot embodiments, using action-conditioned future-feature prediction, inverse dynamics, and masked-present prediction. We then transfer the learned visual and context encoders to a causal monitor and apply temporal supervised fine-tuning (Temporal SFT), which combines supervision throughout each observation window with consistency objectives within and across overlapping windows. At deployment, RoboMonitor requires only the task instruction and camera observations. On a four-task monitoring benchmark, RoboMonitor trained with 52 labeled episodes achieves 93.1% mean phase accuracy and 85.9% macro recall over two fine-tuning seeds, exceeding Qwen3-VL and Robometer trained with the same monitoring supervision. Its phase accuracy also exceeds that of both Qwen3-VL and Robometer trained with 100 episodes. A Qwen3-VL ablation shows that Temporal SFT reduces mean spurious phase switching from 15.23% to 4.95%. In closed-loop deployment, the integrated system completes 39 of 40 simulated Toolbox Sorting trials and 35 of 40 real-world Reel Packing trials, with no false recovery triggers observed.
https://arxiv.org/abs/2609.30715
A useful visual representation is a statistic of the observed past that retains the latent factors shared with the future and discards patch-private noise. We formalize this requirement as a conditional predictive sufficient statistic (CPSS). Under a shared-factor model of image patches, the mutual information between the past and the next patch equals the information the past carries about the shared factor, up to a remainder that the next patch itself fails to reveal. Predicting the next patch embedding with a cosine loss is maximum likelihood for a von Mises-Fisher model of that embedding's direction, and is therefore a tractable surrogate for the predictive information. The same population loss is also minimized by a constant embedding, so stop-gradient does not by itself select the sufficient statistic; it only blocks the symmetric gradient that implements the constant solution in one step. The regression target is a shallow embedding, which forces the network output back into that shallow range and leaves the sufficient statistic in intermediate blocks. Small causal Transformers on MNIST and CIFAR-10 are used as diagnostics, not as a leaderboard. On MNIST the future shift and the stop-gradient move probe accuracy by tens of points, and the CPSS readout peaks before the output. On CIFAR-10, with the same short budget and no augmentation, every objective lands near a linear classifier on pixels. What still matches the derivation is the geometry: the CPSS output is a worse readout than its best intermediate block, next-pixel regression does not pay that penalty, and removing the stop-gradient collapses the effective rank of the embedding even when the pretext loss looks perfect.
https://arxiv.org/abs/2609.30647
Autonomous navigation in previously unseen environments requires effective perception, persistent environmental representation, and collision avoidance while maintaining progress toward a goal. Existing perception-based methods often rely on prior maps or short-horizon observations, limiting their ability to exploit previously observed structure. We propose a memory-aware multi-sensor navigation framework that integrates LiDAR and RGB perception, online distance-field representation learning, and a stage-adaptive Modulated Control Barrier Function Quadratic Program (MCBF-QP). The framework persistently represents static infrastructure while tracking dynamic obstacles, enabling the MCBF-QP controller to exploit previously observed geometry for obstacle circumvention and adapt its safety constraints and guidance to local conditions. Experiments in complex indoor and outdoor environments demonstrate improved navigation efficiency and goal-reaching performance while maintaining collision avoidance in narrow passages and around dynamic obstacles.
https://arxiv.org/abs/2609.30495
Driving world models learn rich predictive representations of the surrounding environment from visual observations, yet accurate visual prediction does not necessarily translate into effective trajectory planning. We argue that a key bottleneck lies in the mismatch between visual world states and raw geometric trajectories, which may limit the planner's ability to exploit action-relevant semantics encoded by the world model. To address this issue, we propose World-Model Alignment for Latent Trajectories (WALT), which learns a compact generative trajectory latent space by transferring information from a frozen pretrained driving world model without modifying the world model itself. Rather than directly generating raw waypoints, WALT maps them into compact representations through a dual-branch trajectory autoencoder and transfers semantic knowledge from the frozen visual world model into this trajectory space, encouraging the learned action representation to capture scene-level cues relevant to future motion and planning. Beyond our proposed formulation, we systematically study latent learning based on Joint-Embedding Predictive Architectures (JEPA) and feature alignment following Representation Alignment (REPA) to investigate how trajectory-only representation learning affects downstream planning. We evaluate WALT on the NAVSIM benchmarks. Relative to the raw-waypoint baseline, WALT improves PDMS from 89.4 to 89.8 on NAVSIMv1 and EPDMS from 87.3 to 87.9 on NAVSIMv2 while reducing trajectory planner FLOPs by 30.5%. These results suggest that preserving world representations while extracting action-relevant information provides an effective interface for world-model-based trajectory planning.
https://arxiv.org/abs/2609.30436
Objective: Heart failure (HF) presents a healthcare challenge due to its high comorbidity burden, aging patient population and frequent hospitalizations. Remote monitoring offers a promising approach to managing HF patients by early detection of health deterioration. Developing autonomous systems to detect signs of worsening in telemonitoring data is of interest to reduce the workload of healthcare personnel. Methods: We propose the TRACER model, a Transformer with Contrastive Event Representation, designed to predict timelines leading to rare hospitalization events in low-resolution and irregularly sampled telemonitoring data. TRACER incorporates time-aware embeddings for each biomarker, contrastive pre-training to enhance anomaly detection via representation learning, and independent binary classifiers for detection. We used measurement data containing remotely recorded biomarker sequences from 276 HF patients segmented into overlapping windows based on temporal rules, and labeled the windows based on the occurrence of HF relevant hospitalizations at the latter edge of the window. Results: TRACER was able to correctly predict 66.7% timelines leading up to HF hospitalizations in the highly imbalanced real-world dataset with an overestimation of 7.9%. Reformulating the training of TRACER as an event detection problem improved the predictive performance compared with training directly on forecasting windows, enabling more effective use of the limited hospitalization events. Conclusion: TRACER demonstrated superior performance in detecting signs of worsening status in real-world telemonitoring data compared to the other tested models. Significance: TRACER shows promise in identifying signs of clinical deterioration that allow for alerts to be generated to provide counteractive treatment in patients with HF.
https://arxiv.org/abs/2609.29742