Trajectory representation learning underpins a wide range of trajectory analytics tasks; however, most existing self-supervised approaches, whether discriminative or generative, adopt an open-loop paradigm, relying on fixed data augmentations or random masking without feedback, which limits their ability to generalize and scale. We propose REFINE, a simple yet effective Representation lEarning Framework vIa closed-loop traNscription rEfinement for trajectory data. Drawing upon feedback control theory, REFINE tightly couples road-network-aware generative reconstruction with feedback-driven contrastive learning, enabling the model to capture fine-grained local movement semantics and global spatio-temporal dependencies without manually designed augmentation views. We further provide a control-theoretic analysis that establishes convergence guarantees for the proposed closed-loop optimization. Extensive experiments on four real-world datasets demonstrate that REFINE consistently outperforms state-of-the-art methods across multiple downstream tasks while remaining computationally efficient and scalable. This paper is an extended version of REFINE: Trajectory Representation Learning via Closed-Loop Transcription, to appear in KDD 2026.
https://arxiv.org/abs/2609.07206
Asynchronous federated learning improves scalability by updating the global model from a server-side buffer of client updates as they arrive, rather than waiting for all selected clients to finish. While efficient, this arrival-driven aggregation can silently distort representation learning under heterogeneous participation. We identify silent rarity failure, a hidden failure mode in which clients holding rare labels contribute too weakly to the global model even though its overall accuracy appears largely unaffected. This failure arises from two coupled effects: rare-label clients may submit updates less frequently when they are slower or less available, creating participation bias; and once their updates enter the buffer, standard asynchronous aggregation assigns them no compensating influence, creating aggregation bias. We propose FedRAW, a fully server-side aggregation method that preserves rare-label influence without changing local training, client objectives, or communication protocols. FedRAW combines client-level update deduplication, which prevents frequently arriving clients from repeatedly dominating the update buffer, with rare-label-aware weighting, which increases the influence of clients carrying low-coverage labels. We formalize silent rarity failure through participation and aggregation bias, and show that FedRAW increases rare-label client influence over uniform aggregation while preserving convergence. Across EMNIST Balanced, CIFAR-10, HAM10000, and ISIC-2019, FedRAW improves rarelabel accuracy while preserving comparable global accuracy and adding negligible server-side computation.
https://arxiv.org/abs/2609.07192
Long-term electricity-consumption profiles exhibit several simultaneous periodic structures, including daily, weekly, and annual cycles. This work introduces Calendar-SPCA, a calendar-structured sparse principal component method that incorporates this known multi-periodic geometry directly into low-dimensional representation learning. The feature domain is represented as the Cartesian product of cyclic calendar axes, and a low-rank factorization is estimated using an L1 loading penalty together with graph total variation over the resulting calendar graph. The method therefore produces sparse and locally coherent loading patterns that remain directly readable in their original temporal coordinates. Calendar-SPCA is evaluated on two independent smart-meter datasets with different sample sizes and temporal resolutions: GoiEner and Low Carbon London. A factorial experiment characterizes the complementary effects of sparsity and calendar coherence and examines robustness across sample size, latent dimensionality, and repeated fits. At rank 15, Calendar-SPCA retains 96.92% and 82.90% of the explained variance of rank-matched PCA in GoiEner and Low Carbon London, respectively, while producing mean loading sparsities of 61.95% and 81.50%. Comparisons with classical sparse PCA and SPCA-TV further show that Calendar-SPCA adds a systematic organization of the latent factors in the original calendar coordinates while preserving substantial low-rank information. The resulting components form coherent and complementary daily, weekly, seasonal, and jointly localized calendar patterns, with dataset-specific geometries across the two datasets.
https://arxiv.org/abs/2609.06060
Recent advances in Earth Observation representation learning accommodate heterogeneous sensors and missing observations, often through larger architectures. We present MEOX (Multimodal Earth Observation with eXperts), a multimodal masked autoencoder with a 2.939 million-parameter encoder and 3.115 million parameters in total. Sensor-specific adapters, explicit validity signals, and a shared sparse-expert block preserve modality-dependent processing before a learned patch-wise fusion. Four metadata tokens then accompany a single spatial sequence through fourteen further encoder blocks. Shared expert projections with private low-rank residuals constrain parameter growth, while rotary attention supports downstream spatial grids different from pretraining. The model is pretrained on 1.228 million MMEarth64 samples using modality-balanced masked reconstruction and structured sensor dropout. Frozen transfer is evaluated on six GEO-Bench tasks at both 64 and 224 pixels. The model reaches 64.42% mean intersection-over-union on cashew segmentation at 64 pixels and 90.56% average accuracy on EuroSAT at 224 pixels, exceeding the corresponding reported CSMoE results. BigEarthNet finetuning reaches 72.95% micro-average precision. Routing diagnostics distinguish expert participation, spatial dependence, modality association, and functional contribution. A held-out WorldCover probe measures a 0.64-percentage-point benefit from metadata, while retrieval separates same-sensor semantics from cross-sensor alignment. These results demonstrate sensor-flexible representation learning and strong task transfer using a compact parameter budget.
https://arxiv.org/abs/2609.05351
Computational phylogenetics has become an essential tool in historical linguistics, yet its application at a global scale remains constrained by two factors: the labor-intensive manual annotation of cognacy judgments required for character-based methods and the substantial computational cost of inference on large datasets. This paper introduces a fully self-supervised contrastive learning framework that learns lexical representations directly from raw IPA-transcribed wordlists, without requiring cognacy annotations, alignments, or additional expert input. The model employs a dual contrastive objective: a word-level loss that organizes phonetically similar forms into a coherent space, and an auxiliary language-level loss that encourages the lexical space to reflect broader phonological properties of languages. From the resulting word representations, pairwise language distances are derived and used to infer a global phylogenetic tree of 3,399 language varieties. The inferred tree achieves a generalized quartet distance (GQD) to the Glottolog reference tree competitive with multiple baselines, while requiring only minutes of computation on a standard notebook GPU. Furthermore, the same representations capture diachronic concept stability: variance in pairwise distances across languages yields stability rankings that correlate significantly with established rankings. Ablation studies confirm that both the language-level objective and the use of phonetic feature vectors improved the inferred trees topology with regards to GQD. The framework thus provides a computationally efficient and fully automatic alternative for large-scale phylogenetic inference and offers a unified representation supporting downstream analyses at both the language and concept level.
https://arxiv.org/abs/2609.05262
Graph representation learning (GRL) serves as a canonical paradigm for modeling complex networks. However, real-world AI systems inherently manifest as evolving heterogeneous entities with complex interactions, posing significant challenges to static or homogeneous modeling. To address these complexities, representation learning for Dynamic Heterogeneous Graphs (DHGs) has emerged as a vital approach for learning low-dimensional representations that simultaneously preserve structural semantics and temporal dynamics. This survey presents the first systematic review of DHG representation learning methods. We first introduce a unified formal definition that encompasses both discrete-time and continuous-time DHGs from the perspective of temporal granularity. Building upon this formulation, we propose a novel algorithm-centric taxonomy that categorizes existing literature, including early embedding-based approaches, graph neural network (GNN)-based models, and relatively recent Transformer-based DHG methods, while explicitly highlighting their intrinsic modeling biases with respect to dynamic granularity. Furthermore, we summarize representative applications of DHG representation learning, along with commonly used datasets and benchmarks. Finally, we discuss promising research directions that guide future advances in this rapidly evolving field.
https://arxiv.org/abs/2609.04779
We construct a corpus of 1,262 verse-commentary (urai) pairs from five Classical Tamil source sections, ranging from technical grammatical prose to modern paraphrase, and ask what information representation learning can recover. We train recurrent and Transformer encoders, a Siamese-style pair-matching network, an mBART-style encoder-decoder, and a decoder-only language model. Each analysis is interpreted against an appropriate control on the same data. TF-IDF provides a strong no-training lexical retrieval baseline, alongside representation analyses and generation controls for the learned models. A fixed string containing the 25 most frequent commentary words scores higher on generation overlap than the decoder-only model. Canonical correlation reaches 1.000 on Gaussian noise at these sample sizes, token-F1 spans only about 0.02-0.20 on this corpus, and the encoder-decoder continues to lower training loss for sixteen epochs after validation loss has begun to rise. One narrow result remains: the decoder-only model prefers authentic word order in 107 of 112 minimal-pair comparisons (95.5%), but does not reproduce held-out commentary content. We release the extraction and evaluation protocol; redistribution of the source commentaries remains subject to permission.
https://arxiv.org/abs/2609.04755
Wireless foundation models (WFMs) have emerged as a promising approach for learning reusable representations from large-scale wireless data and adapting them to downstream tasks. However, the rapidly growing literature remains fragmented across modalities, pretraining objectives, architectures, adaptation strategies, and evaluation protocols, making it difficult to assess progress toward broadly transferable models. This survey provides a systematic analysis of WFMs for physical-layer applications. We first introduce the main WFM design components, including pretraining, backbone architectures, and downstream adaptation. We then organize the literature into five physical-layer task families: signal recognition and demodulation, channel representation learning, RF sensing and localization, beam management, and spectrum sensing and monitoring, while separately examining multi-task PHY models. Across these categories, we analyze how existing models are pretrained, adapted, and evaluated, with particular attention to downstream task diversity and the distinction between in-distribution, partial-shift, and out-of-distribution transfer. Our analysis shows that current WFMs provide increasing evidence of reusable wireless representations, but this evidence varies considerably across task families and evaluation settings. Differences in datasets, modalities, architectures, pretraining objectives, adaptation protocols, and distribution shifts make it difficult to determine which design choices drive transfer and generalization. We conclude by identifying open directions for improving data availability, evaluation rigor, generalization, efficient adaptation, and real-world deployment, providing a unified framework for understanding the current WFM landscape and the requirements for developing more reusable foundation models for future physical-layer wireless systems.
https://arxiv.org/abs/2609.04707
Learning rich medical concept representations is essential for EHR prediction. Text-attributed knowledge graphs (TKGs) provide a natural foundation by organizing heterogeneous medical relations together with textual semantics. However, most existing encoders process concepts uniformly across patients, despite the fact that a code's meaning and predictive value depend on patient-specific clinical context and trajectory. Learning patient-personalized concept representations from TKGs introduces two key challenges: (1) deciding how much KG context to incorporate for each observed code, and (2) aligning semantic information with the patient-specific relational structure. We propose REFINE, a KG-aware budgeted LLM graph refinement framework for patient-personalized medical concept encoding. Starting from a global TKG, REFINE constructs patient-specific temporal graphs. A sequential reinforcement learning policy selects a personalized KG expansion budget for each observed code. The resulting patient graph is processed by a heterogeneous GNN to capture relation-aware structural dependencies, while a frozen LLM uses graph-aware soft prompts to semantically refine concept representations. Experiments on MIMIC-III and MIMIC-IV show that REFINE consistently improves diverse EHR backbones, outperforms strong baselines, and demonstrates robust gains across component ablation, KG selection, and data insufficiency.
https://arxiv.org/abs/2609.04415
Pathology foundation models improve transferable representation learning for histopathology, but recent gains often rely on encoders with hundreds of millions of parameters and high inference cost. We propose TAP-Path, a task-adaptive compression framework that directly restructures a pretrained Virchow2 encoder rather than distilling it into a separate student. TAP-Path combines validation-driven transformer-block selection, physical removal of redundant blocks, input-adaptive patch-token pruning, multi-depth feature recovery, and a lightweight gated task head. The final model retains 24 of 32 transformer blocks and 70% of patch tokens after pruning, reducing encoder parameters by 24.96% (631.24M to 473.70M) and analytical encoder compute by 35.20% (340.13G to 220.40G FLOPs). Across three task-head optimization seeds, TAP-Path achieved $87.98 \pm 0.067%$ test accuracy, $81.26 \pm 0.49%$ balanced accuracy, and $82.38 \pm 0.48%$ macro-F1 on a 32-class histopathology benchmark, compared with 86.89% for full Virchow2 and 87.67% for UNI2-h. TAP-Path achieved a Brier score of $0.1800 \pm 0.0005$ and failure-detection AUROC of $0.9047 \pm 0.0060$. A validation-only rare-aware objective improved rare-class balanced accuracy in a secondary operating analysis. Frozen external evaluation on 433 CPTAC samples yielded $91.22 \pm 0.83%$ accuracy and $91.10 \pm 0.81%$ balanced accuracy. These results show that task-adaptive structural and token sparsification can improve the accuracy-efficiency trade-off of large pathology foundation models while preserving reliability under internal and external evaluation.
https://arxiv.org/abs/2609.04071
Verifying that manufactured batches of milling tools or carbide rotary burrs conform to production order sheets remains a largely manual and error-prone quality assurance task. Automating this process with computer vision faces a critical cold-start constraint since no labelled imagery is available, leaving manufacturer catalogue photography as the sole source of supervision. We investigate how far catalogue supervision can support an industrial recognition pipeline under domain shift, explicitly measuring the gap between catalogue separability and performance on held-out field photographs. Our findings reveal three key insights. First, off-the-shelf frozen feature extractors do not reliably separate the two task attributes, head shape and tooth profile, motivating targeted representation learning. Second, metric learning produces near-perfect unsupervised cluster discovery on catalogue images (adjusted Rand index 0.94--0.97), but less than half of this gain transfers to field photographs. Third, the largest transfer gains do not come from model scale or representation complexity, but from simple changes that reduce domain sensitivity: converting images to grayscale (+0.22) and constraining retrieval using the known order sheet via Hungarian assignment (+0.11). We therefore treat catalogue photography as a useful cold start rather than a deployment-ready training domain, and provide empirical baselines and an evaluation protocol for catalogue-to-field transfer in precision tool manufacturing.
https://arxiv.org/abs/2609.03995
For robots to operate reliably in real-world environments, they need to perceive their surroundings, act, and reason about the consequences of those actions. Rapid progress in the domains of representation learning, VLA models, and world models has significantly enhanced the capabilities of robot learning systems, enabling robots to work in increasingly complex environments. However, these paradigms are typically developed in isolation, resulting in fragmented systems that struggle with generalization, long-horizon temporal reasoning and planning, and deployment in unstructured environments. In this survey, we present a unified perspective on robot learning by organizing the existing methods along three complementary axes: understanding through representation learning, acting through VLA models, and reasoning through world models. We introduce a structured taxonomy that captures key design choices in environment representation, policy learning, and predictive modeling, and summarize the recent progress in these domains. Beyond classifying the existing works, we analyze how these components interact, discuss common limitations, and highlight emerging trends towards more integrated systems. Through this lens, we identify the challenges in the domain of robot learning, including uncertainty quantification, out-of-distribution generalization, cross-embodiment transfer, long-context understanding, and long-horizon planning. We argue that these challenges arise not only from limitations within individual components but also from the lack of integration across perception, action, and reasoning. Building on this analysis, we outline future directions towards unified, physically grounded, and probabilistic robot learning to develop robust robotic systems that maintain consistent internal representations and support decision making over extended interactions in real-world environments.
https://arxiv.org/abs/2609.03927
Reconstruction-based anomaly detectors are accurate but opaque: a deep autoencoder flags a sample without telling a practitioner which feature ranges made it anomalous. We propose DIFFINT, an autoencoder whose latent bottleneck is structured as a set of soft, axis-aligned interval memberships learned end-to-end directly from raw numerical data, without any discretization or binarization. Each latent unit corresponds to a human-readable hyper-rectangle in feature space; an instance is encoded by how strongly it falls inside each interval relative to the other units, and its reconstruction error is the anomaly score. This keeps the power of differentiable representation learning while exposing an inspectable internal structure. We make the inductive bias precise: a certified reconstruction-error lower bound for points that fall outside every active coordinate of the learned support (with a Lipschitz-enforced decoder), and a graded, empirically verified suppression mechanism for the usual case in which only a few features are abnormal; and we provide a closed-form, label-free importance that ranks each (unit, feature) pair from quantities the model already maintains, turning trained intervals into auditable candidate constraints without ever seeing an anomaly label. On 48 ADBench benchmarks against 22 baselines under a common [-1, 1]-normalized protocol, DIFFINT attains the best mean rank overall on both metrics (4.10 on ROC-AUC, 4.16 on AUPR); among inlier-only detectors it leads its regime clearly, and it is competitive with the strongest contaminated-data detectors (see the stratified and complete-case analyses). It is the only interpretable detector in the statistically-tied leading cluster of seven methods.
https://arxiv.org/abs/2609.03878
Collaborative perception enhances environment understanding through multi-agent information sharing, but its performance in real-world scenarios is constrained by heterogeneous sensor modalities and model architectures. Recent protocol-based two-stage methods alleviate this problem by mapping heterogeneous features into a shared protocol space; however, independently trained modality-specific converters often generate modality-specific pseudo-protocol distributions, leading to semantic inconsistency and error accumulation, which is particularly pronounced in scenarios with large modality discrepancies. To address this issue, we propose CauseCollab, a causal unified and modality-agnostic network. CauseCollab formulates representation learning in the protocol space from a causal perspective, explicitly disentangling semantic factors from modality-specific statistical confounders via causal metric learning. Meanwhile, CauseCollab adopts context-guided Unified Converter for heterogeneous modalities to ensure cross-modal semantic consistency. In addition, integrating new modalities only requires training adapters with minimal parameters. Extensive experiments on the OPV2V and DAIR-V2X datasets demonstrate that CauseCollab achieves state-of-the-art performance, with more significant gains in scenarios involving large modality gaps.
https://arxiv.org/abs/2609.03818
General-purpose code embeddings power tools for code search, classification, and retrieval. Compact transformer encoders for code typically rely on either human-written docstrings (labor-intensive and inconsistent) or mined structural signals such as execution traces (setting-specific and costly to collect). We empirically study an alternative: contrastive pretraining of small encoders with synthetically generated natural-language descriptions emphasizing code functionality and intent, paired with code in a dual-encoder framework at training and discarded at inference. We benchmark this approach against pretraining-based baselines, generalist LLMs, and embedding-specific models on eight retrieval, classification, and generation tasks across C, C++, and Java. Synthetic semantic supervision yields statistically significant gains over pretraining baselines of the same inference-time size on five of eight tasks, with parity on two more; once fine-tuned, it matches or exceeds zero-shot models two orders of magnitude larger on classification, and it stays on par with execution-aware supervision at matched pretraining data, suggesting a scalable, effective alternative to existing code-representation paradigms.
https://arxiv.org/abs/2609.03702
Sign language dictionaries are essential resources for sign language learners, yet automatically retrieving a sign from a dictionary, given only a query video, remains a challenging problem due to the natural variability between signers. Existing sign representation learning methods are built for closed-set recognition, producing embeddings that do not generalise to the open-set, signer-independent setting that retrieval demands. \textbf{SignSeek} closes this gap by contrastively learning sign representations with saliency-guided articulator masking. A contrastive objective aligns same-gloss signs across signers, while our Articulator Saliency-Guided Masking (ASGM) pinpoints the single most critical articulator per sign. This drives two complementary objectives, a masked contrastive alignment (MAC) loss that sees the sign through a single articulator and a masked prediction (MAP) loss that reconstructs it in latent space from the surrounding spatio-temporal context. Pretrained on 266K samples ($\sim$5,700 glosses) across multiple sign languages, \textbf{SignSeek} sets a new state-of-the-art performance in cross-corpus retrieval on ASL-Citizen, WLASL, and NMFs-CSL without any downstream fine-tuning. Strikingly, it achieves zero-shot generalisation to an entirely unseen British Sign Language (BSL), surpassing methods explicitly trained on BSL, and transfers seamlessly to isolated sign recognition and subtitle alignment, outperforming prior skeleton-based methods.
https://arxiv.org/abs/2609.03695
The joint interpretation of metabolic function and anatomical structure is essential for clinical diagnosis in whole-body PET/CT. Although recent advances in 3D medical vision-language models have demonstrated remarkable progress, current efforts are limited to regional CT imaging, leaving a critical void in comprehensive whole-body PET/CT analysis. In this work, we introduce MetaStructAtlas, a large-scale dataset for grounded whole-body PET/CT interpretation that synthesizes multimodal imaging with integrated anatomical, metabolic, and semantic annotations. MetaStructAtlas provides 490 co-registered 3D PET and CT volumes with 50,470 organ-level segmentation masks and grounded radiology reports. To facilitate interactive reasoning, we further developed MetaStructVQA, a standardized 3D grounded visual question-answering benchmark containing 100,565 QA pairs. This framework explicitly links diagnostic queries to visual evidence across modalities, encompassing anatomical, morphological, and metabolic characteristics. Finally, we evaluate state-of-the-art 3D medical VLMs on MetaStructVQA, establishing a robust foundation for multimodal representation learning and integrated whole-body reasoning in nuclear medicine.
https://arxiv.org/abs/2609.03690
As integrated circuit technology scales into the nanometer regime, the traditional disconnect between logic synthesis and physical design has led to significant PPA (Power, Performance, and Area) degradation and prolonged design closure cycles. Traditional logic synthesis relies on non-physical Wire Load Models (WLMs), while recent spectral-based placement predictors often neglect the inherent hierarchical logic depth and signal flow of netlists, which leads to low-fidelity spatial estimations. To bridge this gap, we propose LevelSyn, a novel physical-aware logic synthesis framework that integrates hierarchical representation learning with a wirelength-driven optimization engine. At its core, LevelSyn leverages a level-asynchronous Graph Neural Network (GNN) to predict high-fidelity gate coordinates by capturing the structural and directional semantics of And-Inverter Graphs (AIGs). To handle industrial-scale designs, a level-aligned subgraph partitioning strategy is introduced to eliminate memory bottlenecks while preserving local logical dependencies. These spatial insights are seamlessly integrated into a newly developed physical-informed synthesis engine within the Berkeley ABC framework. Experimental results on the EPFL benchmark suite demonstrate that LevelSyn significantly outperforms state-of-the-art (SOTA) methods, achieving an average power reduction of 6.89\% and a timing delay improvement of 27.48\%. Furthermore, post-place-and-route validation shows a 99.59\% reduction in design rule check (DRC) violations, highlighting its effectiveness in accelerating design convergence.
https://arxiv.org/abs/2609.03594
Generative retrieval has demonstrated significant success by unifying representation learning and search into a single sequence-to-sequence generation task. However, extending this paradigm to cross-modal retrieval reveals a critical challenge arising from the inherent information asymmetry across different modalities, such as the gap between concise text queries and dense visual candidates. This structural mismatch causes the autoregressive decoder to suffer from forced hallucination when generating identifiers via standard trie-constrained beam search, where the model is severely penalized for failing to guess fine-grained details absent from the query, allowing irrelevant candidates to hijack top rankings. To address this issue, we propose Wildcard Inference with Dynamic Expansion (WIDE). WIDE employs Adaptive Entropy Thresholding (AET) to calibrate layer-specific uncertainty boundaries offline. During the decoding generation phase, Asymmetry-aware Wildcard Decoding (AWD) detects semantic blind spots and emits wildcards instead of forced deterministic identifiers, dynamically expanding the search space without incurring log-probability penalties. Finally, Blind-Spot Re-ranking (BSR) evaluates the expanded candidate pool using a hybrid scoring mechanism that combines discrete generation confidence with continuous semantic similarity. Extensive experiments on the M-BEIR benchmark demonstrate that WIDE outperforms state-of-the-art generative retrieval methods, effectively suppressing forced hallucination while maintaining compact index structures.
https://arxiv.org/abs/2609.03554
Path representation learning (PRL) for road networks has received increasing research attention, due to various path-related applications. Existing works on PRL typically exploit the co-occurrence relationship among road segments and paths to learn a vector as the path representation, without exploring the varied traveler behaviors and the regional correlation on the path. In this work, we propose to learn distributional representations, which provide valuable information for use in path-related applications, by capturing the varied traveler behaviors as well as the various dependencies within regions of road segments. We propose a novel Transformer-based Multi-view Distributional Representation Learning (TraveL) framework to encode a path along with a travel starting time to a distributional representation, which can be used to decode possible samples of on-path traveler behavior. Moreover, by analyzing the regional correlation which reveals various road segment relationships, we propose a regional attention to encode these correlations in a path. Also, we explore the idea of Kolmogorov-Smirnov (K-S) test to compare the sampled traveler behavior against the collected ground truth to facilitate training. Experimental results show that the proposed TraveL model outperforms the state-of-the-art methods on both synthetic and real-world datasets, by 14.7% in Mean K-S distance for travel time distribution estimation, 16.7% in Mean Absolute Error (MAE) for path similarity prediction, and 3.97% in MAE for destination prediction.
https://arxiv.org/abs/2609.03427