Same-instance self-supervised learning (SSL) learns representations by enforcing consistency across two views of the same underlying instance. This principle alone, however, does not determine which downstream tasks remain recoverable from the learned representation. We study this question through \emph{semantic recoverability}, defined as the amount of a task's posterior score captured by the represented function space. We show that, for centered and whitened representations, recoverability exactly determines directional class-distance-normalized variance (CDNV), controls few-shot nearest-centroid classification, and governs the strength of task-relevant semantic directions. The population linear probe and centroid axis coincide, and multiple well-recovered tasks approach a factorial centroid geometry. We then analyze a canonical two-view SSL objective and show that its population optimum spans the leading cross-view-stable modes of the associated two-view operator. This yields a closed-form spectral characterization of semantic recoverability: a downstream task is preserved to the extent that its posterior lies in the selected spectral subspace. We validate these predictions on synthetic and real datasets across several SSL methods, testing the predicted relationships among recoverability, directional geometry, spectral structure, and few-shot transfer. Together, these results give a task-level account of what information survives same-instance SSL and how the retained information appears in downstream geometry and transfer.
https://arxiv.org/abs/2609.38393
Generative vision-language models (VLMs) such as Qwen-VL and LLaVA achieve strong zero-shot performance on tasks overlapping with their pretraining distribution, yet fail on specialized domains where the required discriminative features were never learned, a regime we term distant out-of-distribution (OOD). Standard adaptation methods cannot overcome this representational absence because they operate within the encoder's existing feature space. However, VLMs retain a robust descriptive capacity even when discrimination collapses: a model that cannot classify a medical scan can still articulate its visual patterns. Exploiting this asymmetry, we introduce Inductive Visual Logic (IVL), a training-free framework that constructs classification knowledge from the model's surviving descriptive ability. IVL extracts visual traits from few-shot support images through dual-mode prompting, combining semantic descriptions with primitive visual observations, and organizes them into per-class trait dictionaries. At inference, hierarchical filtering identifies spatially grounded trait evidence for classification. Across multiple distant-OOD benchmarks, IVL achieves the highest aggregate accuracy under two VLM backbones while producing interpretable, trait-traceable predictions.
https://arxiv.org/abs/2609.38362
Model-based judges support agent security by detecting prompt injections, assessing interaction risks, and screening harmful requests. System One models select from predefined answers and report probabilities that software can use to allow, block, or review inputs, but the reliability of these automated decisions remains unclear. We evaluate Jev, Laya, Decider, and Bespoke Nimble against specialized classifiers and language-model judges, examining decision accuracy, probability calibration, and selective automation. We draw the following conclusions. (1) Strong overall performance and favorable aggregate calibration can hide failures concentrated in particular attack groups, including attacks classified as safe with high confidence. (2) The evaluated adapted configurations do not consistently improve classification over their base models across tasks. (3) Under the strictest evaluated error limits, the policies allow few inputs automatically, and separate allow and block thresholds increase automation mainly through more blocks. Passing confirmation does not ensure that these limits hold on test. (4) Judges can detect attacks missed by another model, but may also falsely flag more benign inputs and share the other model's high-confidence errors. These findings support evaluating model accuracy, probability calibration, and the resulting allow/block/review decisions together.
https://arxiv.org/abs/2609.33401
Brain networks characterize structural and functional relationships among brain regions and support research on cognition, brain disorders, and brain-computer interfaces. Their time-varying topology and higher-order spatiotemporal dependencies are not adequately represented by conventional static networks. Existing tools primarily focus on static connectomes and provide limited integration of dynamic network modeling with modern graph and sequence learning methods. We present BrainNet Studio, an integrated toolkit for static and dynamic brain network analysis. It provides a unified workflow encompassing network construction, feature extraction, predictive modeling, candidate biomarker identification, visualization, and assisted interpretation. The toolkit integrates 27 algorithms, including deep learning, graph neural networks, and spatiotemporal sequence models, to support classification and the identification of discriminative brain regions and connections. A large language model generates researcher-verifiable summaries of functional connectivity, structural connectivity, and structure-function coupling at individual and group levels. Within a consistent computational framework, users can configure analytical tasks, compare methods, inspect outputs, and extend functionality without repeatedly assembling application-specific pipelines. BrainNet Studio provides a practical and extensible platform for connectome analysis in cognitive neuroscience, exploratory studies of brain disorders, and brain-computer interfaces. The toolkit is publicly available at this https URL.
https://arxiv.org/abs/2609.37956
Every text classifier for an African language begins with a budgeting question: how many labelled examples are needed, and can labels from other African languages stand in for them? We answer both questions empirically for 28 language-task pairs, news topic classification in 16 languages (MasakhaNEWS) and tweet sentiment in 12 languages (AfriSenti), using a character n-gram linear model that trains in seconds on two CPU cores with no pretrained weights and no accelerator. Monolingual learning curves at budgets from 25 to several thousand labels show that topic classification reaches 90\% of its full-data macro-F1 with about 400 labels in the median language, while sentiment is still improving at the full training size in 11 of 12 languages and needs thousands of labels. Pooling the full training data of the other languages in the benchmark is worth a great deal at small budgets and nothing at large ones: at 25 target labels it adds 0.20 macro-F1 on average for news (up to 0.43 for Lingala) and 0.08 for sentiment, the gain decays to zero by 800 labels, and at full size pooling hurts in 9 of 16 and 8 of 12 languages. Twenty-five target labels plus pooled data match what 100 to 400 monolingual labels achieve for most news languages. A complete zero-shot transfer matrix shows that transfer without any target labels recovers a median of only 13\% (news) and 4\% (sentiment) of the gap between a majority-class predictor and the in-language model, with the exceptions explained by shared script (Amharic and Tigrinya), shared lexicon (English and Nigerian Pidgin, the Arabic dialects), or a shared label prior rather than by language family. We release code that regenerates every number from the public benchmark files and translate the results into concrete annotation guidance for teams building African-language classifiers without GPUs.
https://arxiv.org/abs/2609.37882
In the Global South, the lower-income countries of Africa, Asia, and Latin America where most of the world's languages are spoken, a deployed text classifier usually runs on ordinary CPUs, serves many languages with a single model, has few labeled examples in any of them, and relies on people to catch its mistakes. Such a system is only useful if it can promise how often it will be wrong: at most a fixed fraction of the labels it assigns on its own may be incorrect, and everything else must go to a person. Split conformal prediction delivers this promise through a single confidence threshold, normally estimated on validation data pooled across languages. We ask whether the promise reaches every language, and it does not. On MasakhaNEWS (16 African languages) and AfriSenti (12 languages plus two never seen in training), a pooled threshold meets the 90% target on average but covers Somali at 77.5%, Tigrinya at 83.7%, and the two unseen languages at 77.5% and 81.2%. Estimating one threshold per language brings every language to between 89.1% and 91.0% without retraining, and it shows how unequal the cost of the promise is: keeping it means sending 43% of Somali news and over 80% of Amharic and Xitsonga tweets to a person, against under 8% of Nigerian Pidgin news. One or two hundred labels per language are enough and the models train in minutes on one CPU core, so the fix is affordable: calibrate, report, and budget human review one language at a time.
https://arxiv.org/abs/2609.37861
The ByteTrack algorithm is a widely used and computationally efficient multi-object tracking architecture. Its core innovation lies in the combination of lenient bounding box associations with tracklet similarity matching to robustly deal with object occlusions. However, this strategy is nevertheless vulnerable to erroneous track reclassification and identity switching, as detection confidence scores dictate association priority. To address this, I present a simple enhancement of the ByteTrack architecture, named ByteTraX, that optimises track continuity via a single unified matching threshold, while penalising identity switches through stringent track initiation criteria. This approach achieves consistently improved performance across a range of diverse benchmarks including GMOT-40, LC-MOT, SportsMOT, TeamTrack, DAMUNT, and DeepSea-MOT, while simultaneously increasing processing speed by >10%. Specifically, results demonstrate a >40% reduction in identity switches, accompanied by mean increases in HOTA of 3.6, IDF1 of 5.6, and FPS of 6.3. As such, adoption of the ByteTraX algorithm has the potential to substantially enhance tracking performance over the ByteTrack baseline, while retaining the efficiency needed for real-time deployment. To facilitate usage, I provide the source code, integration functionality for the YOLO family of object detection models, and deployment instructions via an open source repository.
https://arxiv.org/abs/2609.37801
Satellite observations, precomputed embeddings, and map products describe the same evolving Earth, yet are stored as independent, petabyte-scale data products. Their continued growth calls for compact representations of multiple products while preserving spatial and temporal detail. We introduce Planetary Feature Fields (PFFs), which exploit redundancy across data products by modeling them jointly as continuous functions of space and time at planetary scale. PFFs are spatially local explicit-implicit (hybrid) neural fields. Each field shares a factored feature volume---a decomposition of an explicit 3D grid with smaller factors---across products, while lightweight implicit decoders reconstruct individual products across multiple timesteps. PFFs reconstruct EO products over space and time more accurately than single-product fields at matched compression rates. At $1800\times$ compression relative to the uncompressed source data, reconstructed features retain approximately $90\%$ or more of the performance achieved with the original features on pixel-level segmentation, change detection, and patch-level classification tasks. PFFs can add new timesteps by extending their factored feature volumes and add new products by attaching new decoders, while leaving existing outputs unchanged. PFFs reduce end-to-end feature access latency by an order of magnitude relative to evaluated API and cloud-storage pipelines.
https://arxiv.org/abs/2609.37784
Purpose: Most Greek papyri remain unpublished and undigitised; a handwritten text recognition (HTR) pipeline that transcribes them automatically would let scholars discover documents and literary works that have so far gone unread. Recognition systems for Ancient Greek papyri are in statu nascendi, and how accurate they must be for a given papyrological task has not been examined. To answer this and set a benchmark for Greek papyrus HTR, we test a range of character error rates (CER) against four papyrological tasks, using published editions as ground truth. Methods: From 63,846 current editions of Greek texts in this http URL, we imitate a letters-only "perfect HTR" output by removing the editorial layer, then degrade it with a seeded algorithm to exact CERs of 1 - 50%, with lost lines and four error-shape variants. On these data we train small models (TF-IDF, fastText, a character CNN, ByT5-small) for document type, dating and documentary-versus-literary classification, and apply eight keyword search methods. We compare models trained on clean text with models retrained at a specific CER level, and evaluate across CERs. Results: Tolerance differs by task. With clean-trained models, documentary-versus-literary classification retains 90% of its metric up to 20% CER; document type up to 7.5%; subtypes and search up to 5%; dating only up to 3%. Retraining on text containing character errors largely eliminates the sharp degradation that otherwise sets in above 15% CER. Models generally tolerate concentrated damage in a long document better than small errors spread across a short text. Conclusion: The study provides a CER target for each of the four tasks and shows that models trained on noisy text make current, imperfect text recognition useful for them.
https://arxiv.org/abs/2609.37755
Morphological characteristics such as spiculation and lobulation play an important role in assessing pulmonary nodules on computed tomography (CT), particularly in relation to malignancy risk. This study examines whether learning radiologist-annotated morphological features together with malignancy risk from lesion-centred 3D CT volumes improves classification performance. The Lung Image Database Consortium and Image Database Resource Initiative (LIDC-IDRI) dataset was used, comprising 3,918 reader-level nodule annotations from 742 patients after excluding indeterminate malignancy ratings. Patient-level splitting was used for training, validation, and testing, with 112 patients and 628 reader annotations in the held-out test set. A single-task 3D convolutional neural network was compared with a multi-task model predicting malignancy risk, spiculation, and lobulation. The single-task model achieved a balanced accuracy of 0.548 and receiver operating characteristic area under the curve (ROC-AUC) of 0.552, while the multi-task model achieved 0.539 and 0.558, respectively. Patient-level bootstrap analysis showed an ROC-AUC difference of 0.005 (95% confidence interval (CI): -0.087 to 0.090) and a balanced-accuracy difference of -0.009 (95% CI: -0.067 to 0.043). The auxiliary tasks were strongly imbalanced and showed limited predictive performance. Overall, including morphological features did not clearly improve malignancy-risk classification, showing the importance of class balance, label formulation, and reader-level annotation structure in multi-task pulmonary CT analysis.
https://arxiv.org/abs/2609.38271
The rapid expansion of large-scale medical datasets and computational resources has driven significant progress in medical foundation models. Given the inherent heterogeneity of medical imaging modalities, current research mainly follows two paths: specialized models optimized for specific modalities, and generalist models designed to handle multiple modalities. However, medical generalist models suffer from both insufficient training data scale relative to natural image generalists and inadequate domain-specific depth relative to medical specialists. Empirically, generalist models establish a cross-modality performance baseline, while specialists define the performance ceiling within their respective domains. To elevate this baseline toward these ceilings, we propose Med-RADIO, a medical multi-teacher distillation framework that Reduces All Domains Into One by compressing complementary expertise from multiple domain-specific teachers into a unified medical vision foundation model. Our method curates both generalist and specialist teachers, allocates modality-aligned distillation streams to reorganize generalist pretraining data so it matches specialist domains, and uses a balanced loss to prevent any single teacher from dominating the distillation process. On internal and external classification benchmarks spanning five modalities, Med-RADIO improves over strong medical generalists under linear probing and remains competitive with representative specialists on most evaluated modalities. Code is available at this https URL.
https://arxiv.org/abs/2609.37682
There has been significant work on understanding the In-Context Learning capabilities of Large Language Models, especially on the induction circuit. For a few-shot classification task, the induction circuit leverages linear representations of each labeled example in-context in order to classify an unlabeled query. However, few works focus on how those linear representations are built in the first place. Leveraging the expressivity of the vision modality compared to text, we uncover a Shared Discriminative Geometry (SDG) inside Large Vision Language Models (LVLMs). It is a low-dimensional space, shared across all image classification tasks, in which in-context images are compressed into linearly separable representations later used to perform classification. We observe that this is the result of the model performing a dimensionality reduction of vision representations in early layers. In order to explain this phenomenon: (1) We show analytically that linear self-attention can perform a dimensionality reduction by projecting in-context data onto its principal components, with each layer implementing one gradient descent step toward this objective. (2) We provide evidence that trained LVLMs reduce the dimensionality of vision representations in early layers via a similar mechanism.
https://arxiv.org/abs/2609.37659
Jev is a commercial System One model from TypeSafe AI that does not generate text: given a state and typed questions, it returns a choice from fixed options, a position on a rubric, or the probability that a statement is true, with probabilities the vendor describes as calibrated. Such models target small decisions in information access pipelines, such as routing queries, checking grounding, moderating content, or rating against a rubric. We evaluate Jev (jev-1.13.0) zero-shot on 37 datasets spanning classification, routing, natural language inference, reading comprehension, commonsense reasoning, moderation, legal clause analysis and rubric scoring, with one frozen template per dataset and full evaluation splits: 346,009 requests for under USD 10. For reference, we score Qwen3.8-27B and Gemma-4-E4B on identical requests via their exact next-token probabilities over the options. Jev reaches 95-99% accuracy on IMDB, SST-2, HellaSwag and ARC and 86.7% on Belebele across 122 languages. It beats Qwen on 27 of 37 datasets, with none of Qwen's nine leads outside the bootstrap intervals, and Gemma on all 37. All three models degrade on low-resource languages, fine-grained or noisy labels, and rubric-based quality judgments. Jev's choice probabilities are well calibrated and support selective prediction. Binary probabilities rank well but are poorly placed relative to a fixed 0.5 threshold; thresholds tuned on training data raise micro-F1 on UNFAIR-ToS from 0.50 to 0.75. Jev answers MMLU's calculation-heavy questions more accurately than other MMLU questions (94% vs. 91%), whereas both open models, and all three on C-Eval, find them harder. Rotating the options leaves Jev's accuracy unchanged and withholding the question drops it to near chance, ruling out shallow memorization but not memorized question-answer pairs. We release the code, harness and all raw responses.
https://arxiv.org/abs/2609.37647
Current explanation methods for contrastive vision--language models such as CLIP mainly identify important regions without showing how to change the input in order to get a target prediction. We introduce \textbf{M}ask-guided \textbf{A}daptive \textbf{C}ounterfactual \textbf{E}xplanations (\mace), a targeted visual counterfactual method designed specifically for CLIP zero-shot classification. \mace constructs an editable region from either source attribution or source--target attribution differences and expands the mask only when needed to reach a specified target class. A latent diffusion inpainting model then modifies the selected region, while a frozen CLIP model provides modification guidance and anchors the remaining image content to the original input. We evaluate \mace on ImageNet, Food-101, Oxford Pets, and CUB-200. The source-mask variant achieves the highest target top-1 success rate across all four datasets, while the difference-mask variant produces the smallest pixel-level and perceptual changes and the best realism scores. Both variants improve proximity and realism over a Stable Diffusion-only baseline using the same generative backbone. These results show that adaptive mask-guided editing produces effective CLIP counterfactuals. They further reveal a tradeoff between counterfactual validity and source-image preservation.
https://arxiv.org/abs/2609.37638
Transformers are typically trained from random initialization, requiring all their capabilities to emerge from large-scale optimization. Recent work showed that a small amount of abstract procedurally generated data can help acquire generic inductive structure at low cost. However, this adds a pretraining stage that must be repeated for every target model. We propose Procedural Core, an initialization strategy that captures this generic structure into a compact set of weights that can be reused across models. We train a minimal recurrent transformer on procedural data, then expand its weights to initialize transformers of arbitrary width and depth. The resulting initialization improves performance on image classification, self-supervised visual learning (DINO), and modeling natural language (FineWeb-Edu) and code (CodeParrot). For image classification, expanding a 1M-parameter core to initialize an 85M-parameter ViT-Base improves ImageNet top-1 accuracy by 2.2 pp over standard random initialization. Our analysis identifies recurrence as essential for learning compact weights that transfer across models. In ViTs, we localize a key benefit in the suppression of high-norm tokens that produces substantial improvements in zero-shot segmentation (ImageNet-S mAP 32.3 to 42.9), object localization (VOC07 CorLoc 9.9 to 18.4), and depth estimation (NYUv2 RMSE 1.104 to 0.998). This demonstrates that transformers need not start from a blank slate, and can be initialized with generic capabilities at low cost with no domain- or task-specific data.
https://arxiv.org/abs/2609.37631
Conventional bioacoustic classification models rely on fixed-rate spectral representations, requiring recordings acquired at heterogeneous sampling rates to be resampled before analysis. We propose a Sampling-Frequency-Independent (SFI) frontend that processes each recording directly at its native sampling rate, coupled with a Fourier Neural Operator (FNO) backbone featuring progressive temporal-scale fusion. This framework avoids fixed-rate resampling and high-frequency information loss while producing fixed-size representations across sampling rates. Mild training-time sampling-rate (\textit{sr}) augmentation further improves robustness to unseen rate variations. Evaluated on a multi-taxa corpus comprising 84 classes and 60 sampling rates, the proposed SFI-FNO configuration outperforms fixed-rate and corpus-maximum-rate baselines, achieving .906 accuracy, .921 balanced accuracy, and a Macro-F1 score of .899.
https://arxiv.org/abs/2609.37540
The development of AI systems for tumor-specific applications is limited by the scarcity of labeled data. Synthetic tumor inpainting offers a promising approach but faces challenges for prostate cancer MRI which contains high-resolution multi-sequence data. Although methods leveraging latent diffusion models (LDMs) enable large-volume synthesis, they are prone to shortcut learning, simply reproducing the condition image created by masking the lesion region. In this work, we introduce PCaPaint, a prostate cancer inpainting method based on LDMs that explicitly addresses this failure mode. To overcome shortcut learning that compromises synthetic tumor texture, we propose a simple yet efficient conditioning strategy in which the condition image is filled with Gaussian noise, and we provide theoretical justification. In addition, we propose a novel training objective for LDM that emphasizes the error within the lesion region. Furthermore, we introduce a multi-sequence latent design, in which T2w scans and DWI&ADC scans are compressed using two separate autoencoders to preserve their distinct frequency characteristics. Extensive experiments demonstrate that the generated synthetic data improves downstream performance in prostate lesion segmentation, patient-level classification and lesion-level detection. Furthermore, our method significantly outperforms a recent state-of-the-art LDM-based tumor inpainting method both in downstream performance and in synthetic image quality.
https://arxiv.org/abs/2609.37350
Hyperspectral remote sensing provides dense spectral measurements that are indispensable for material-level Earth observation, yet the construction of a general-purpose hyperspectral foundation model remains difficult. Two bottlenecks are especially limiting. First, large hyperspectral corpora rarely provide high spatial resolution together with reliable dense annotations. Second, many hyperspectral models are still trained almost from scratch, so the geometric and interactive priors learned by modern vision foundation models are not fully reused. To alleviate these issues, we \highlight{present} \textbf{HyperSAM}, a promptable hyperspectral foundation model that couples a data-centric hyperspectral synthesis pipeline with a spectral adaptation architecture based on Segment Anything Model 3 (SAM3). On the data side, HyperSAM synthesizes full-spectrum hyperspectral cubes from high-resolution SpaceNet multispectral imagery through a physics-informed abundance-transfer generator, while SAM3-derived pseudo-masks provide object-centric supervision. On the model side, the latest implementation uses a frozen SAM3 RGB image branch, a trainable hyperspectral side encoder initialized from the RGB vision transformer (ViT), ControlNet-style zero-initialized feature injection, and a lightweight mixture-of-experts mask refiner. To enhance training robustness against noisy pseudo-labels, Cross-modal Sample Selection (CromSS)-style confidence selection is incorporated for noisy-label weighting. Extensive experiments show that HyperSAM obtains strong generalization on diverse hyperspectral tasks (e.g., classification, anomaly detection, change detection, target detection, and airborne oil-spill mapping) and that high-quality synthetic hyperspectral data can be more effective than simply scaling noisy hyperspectral supervision.
https://arxiv.org/abs/2609.37340
Conformal prediction provides set-valued predictions with distribution-free coverage guarantees, making it attractive for high-stakes image classification. However, split conformal prediction is data-inefficient, while full conformal prediction (FCP), despite its stronger statistical efficiency, is computationally prohibitive at scale because it requires candidate-specific model refits at test time. We address this limitation by leveraging zero-shot vision-language models (VLMs) to guide scalable FCP in large label spaces. We introduce Targeted Full Conformal Prediction (T-FCP), which uses a lightweight inductive conformal predictor to prune unlikely labels and applies FCP only to the remaining candidates, reducing computation while retaining the formal guarantee of the combined conformal procedure. We further propose Stabilized Online LDA (SO-LDA), an efficient VLM adaptation solver based on rank-one inverse-covariance updates. Across multiple benchmarks, including ImageNet, T-FCP enables practical full-conformal image classification with modest test-time overhead, yielding efficient prediction sets and more stable empirical coverage than split conformal alternatives.
https://arxiv.org/abs/2609.37298
Non-injective mappings in neural networks map distinct inputs to the same representation, thereby implicitly inducing equivalence relations in the input space. However, the input differences eliminated by these mappings may still be required by downstream tasks, creating a mismatch between operator-induced indistinguishability and task-required distinctions. For non-injective linear operators realized in the current forward pass, their null spaces exactly characterize these invisible input variations. We propose Task-Relevant Null-Space Residuals (NSR), a general residual framework for non-injective linear mappings. NSR combines null-space component extraction from pre-mapping representations, member-level encoding and gating, and application-specific integration to exploit potentially task-relevant information under downstream supervision while preserving the original aggregation or merging rules. We evaluate NSR in two structurally different settings: token merging and graph aggregation. In token merging, NSR achieves higher semantic segmentation performance than the corresponding compressed baselines in 34 out of 36 evaluated configurations, with a maximum observed gain of 31.51 mIoU points under strong compression. In graph aggregation, NSR achieves 100% training accuracy on Tree-NeighborsMatch at depths d=2--6 across three backbones, alongside gains on heterophilic node classification and molecular graph regression. Together, these results support null-space residuals as a practical complement to non-injective linear mappings, enabling downstream models to learn from input distinctions invisible in the original operator's output.
https://arxiv.org/abs/2609.37272