High-risk applications of deep learning require precise characterization of model decision-making. We conduct a systematic explainability evaluation across Convolutional Neural Networks (CNNs), Vision Transformers (ViTs), and Vision Mamba (ViM). Unlike predominantly qualitative studies, we quantify the alignment between model attention and human visual perception using eye-tracking ground truth. We formalize this comparison via a standardized normalization pipeline mapping post-hoc attribution maps and gaze heatmaps onto spatial probability distributions. Alignment is evaluated across fine-grained classification, medical imaging, and emotion recognition using architecture-specific XAI methods. We measure fidelity using Jensen-Shannon similarity, Chi-square similarity, and Pearson correlation, three complementary estimators capturing support overlap, mass discrepancy, and structural co-variation. Our results reveal distinct attention dynamics: CNNs tend to exhibit a more global focus, with spatially more diffuse saliency maps that correlate well with human perception in general contexts, while ViTs demonstrate fine-grained, patch-level attention, often focused on discriminative microfeatures. The Mamba architecture shows biased behavior: it achieves strong explainability in medical tasks but exhibits divergent intensity distributions in natural images; our analytical characterization of the metrics makes this dissociation explicit, since near-unit support overlap is attained simultaneously with a vanishing linear correlation. We further analyze the effect of backbone freezing and ensemble strategies on model interpretability. The results highlight how architectural and training choices influence the alignment between model saliency and human visual attention.
https://arxiv.org/abs/2610.12703
In this work, we show that a single Transformer block, applied recurrently, can match the accuracy of a full-depth vision encoder at comparable inference FLOPs without intermediate feature distillation. reViT restores depth-specific transformations by representing the FFN at each recurrent depth as a convex combination of a small shared expert bank. A continuous normalized-depth coordinate programs this mixture, defining a resampleable trajectory through FFN parameter space. We evaluate this design in two regimes: supervised ImageNet-1k training and distillation from a DINOv2 teacher. Across both regimes, controlled adaptations identify weight-space merging as the strongest tested MoE family at a matching one-FFN budget, ahead of the token-dispatch and output-mixture alternatives. Trained from scratch, reViT-B/16 attains DeiT III accuracy with about 70\% fewer stored parameters. An 8-experts model distilled using only the teacher's output features retains nearly all of its DINOv2 teacher's linear-probe accuracy and transfers across classification, segmentation, and depth prediction. Elastic-depth training allows one checkpoint (trained model) to operate at multiple tested depths by resampling the same normalized coordinate interval. For fixed-depth deployment, the recurrent block can be materialized as a conventional dense graph, removing online routing and merging without changing the one-FFN-per-depth compute but expanding deployment storage.
https://arxiv.org/abs/2610.12448
Machine learning (ML) in high-energy nuclear physics (HENP) is entering a new stage in which physical knowledge is incorporated more directly into data analysis, simulation, and physics inference. This mini-review focuses on developments that have matured in the past several years. Whereas earlier applications emphasized event classification, pattern recognition, and surrogate models for selected observables, recent work has moved toward physics-integrated workflows: calibrated Bayesian extraction of QCD matter properties, dense-matter equation-of-state inference from heavy-ion and neutron-star data, generative event modeling, neural unfolding of weak physical signals, differentiable inverse solvers, gauge-equivariant and diffusion-based lattice-field samplers, and neural reconstruction of model functions in holographic QCD. We survey recent applications of ML in heavy-ion collisions, neutron-star physics, lattice QFT, and holographic or continuum QCD. The emphasis is not on ML architectures alone, but on how they enter concrete physics workflows, how physical constraints such as symmetries, conservation laws, causality, thermodynamic stability, and topology are imposed, and how uncertainty quantification and validation determine whether an AI-assisted result can support a reliable physics conclusion.
https://arxiv.org/abs/2610.12293
Pre-trained transformer models are increasingly being used to study scientific and technological progress. Encoders tuned to paper or patent text outperform general-purpose models on downstream classification, regression, and proximity tasks within science and technology. However, the applicability of these models for studying time-dependent or archival properties of science, technology, and their interface is limited due to lookahead and domain biases inherent to these pre-trained models. These limitations arise from training on corpora with unconstrained chronological and text source distributions. We introduce SciTBERT: a family of chronologically consistent BERT-derived language models trained on text from scientific papers, patents, and high-quality educational web text with training data cutoff dates spanning each year between 2013 and 2025. We also post-train these models in a chronologically-consistent manner using paper and patent citations, creating SciTBERT-CI model family. We find that these models generally outperform predecessor domain-specific encoder models even when training data is limited by early year restrictions in the corpus. To further investigate the extent to which this class of models can learn representations that bridge science and technology, we introduce the PatRepEval benchmark, a suite of patent-related text embedding tasks at the science-technology interface. Performance in a variety of classification, regression, and retrieval tasks spanning papers and patents highlights the importance of aligning encoder model representations with the domain distributions of their downstream tasks, and chronologically consistent encoders can match or exceed models trained without temporal constraints.
https://arxiv.org/abs/2610.12207
False negatives remain a critical limitation of computer-aided diagnosis (CAD) systems for breast cancer screening due to delayed detection and treatment. To address this issue, we propose a counterfactual data augmentation strategy that generates healthy mammograms by "erasing" lesions from anomalous images, thereby enriching the training distribution. We train a Denoising Diffusion Probabilistic Model on BI-RADS 1 (healthy) mammograms and use a RePaint-based sampling strategy to inpaint realistic normal tissue within annotated lesion bounding boxes. The resulting healthy counterfactuals replace annotated lesion regions with realistic healthy tissue while preserving patient-specific anatomical structure, as supported by similarity metrics between real and generated images. Image realism was further assessed by radiologists and found to be consistent with the original dataset quality. We evaluate counterfactual augmentation across four representative classifier architectures: a convolutional neural network (ConvNeXt), a vision transformer (ViT), a vision-language model pre-trained on mammogram-report pairs (Mammo-CLIP) and a multi-scale attention-based multiple-instance learning framework (FPN-MIL). Experiments conducted on the VinDr-Mammo dataset show improvements in sensitivity across all architectures, particularly at 80\% fixed specificity, contributing towards more reliable CAD systems for breast cancer. Code is available at: this https URL.
https://arxiv.org/abs/2610.12147
Automated methods have been proposed to overcome the limitations of human verbal deception detection, but evidence remains fragmented across disciplines. We systematically reviewed 25 years of research (289 reports, 6,136 classification models) and meta-analyzed 3,653 models nested within 97 datasets. Pooled accuracy was 74.4% (95% CI: 71.2%-77.4%) with substantial heterogeneity. Accuracy was driven by methodological quality (ground truth, data source, class balance, evaluation procedure) more than by model complexity: the adoption of embeddings and large language models has not translated into improved predictive performance. Only 12.46% of reports used data with verifiable ground-truth, and only 23.96% of models were evaluated on independent data. The pooled accuracy aligns with meta-analyses of manual approaches, suggesting a ceiling of 70-75%, unlikely to be lifted by current research conventions.
https://arxiv.org/abs/2610.12118
Vision-based tactile sensors provide rich contact information, but processing high-resolution images can be costly for resource-constrained platforms such as space robots. This work investigates whether a compact representation of tactile motion can classify object rotation across different gravity conditions. Dense optical flow from a simulated GelSight Mini is aggregated over a 7x9 grid into 126 features and used to classify the direction of load-induced rotation under Earth, Mars, Moon, and orbital gravity. Gravity causes a small but significant shift in these features, accounting for 1.6% of their variance (R2 = 0.016). Despite its small magnitude, this shift affects models trained only on Earth data: XGBoost accuracy decreases from 94.4% on Earth to 75.9% in orbit. In contrast, a single model trained across all four gravity domains achieves 96.3% overall accuracy and 95.1%-97.0% across individual domains, without using gravity as an input. The representation can also be reduced to 40 features while retaining 95.7% accuracy, with XGBoost requiring only 0.14 ms per inference. These findings show that Earth-gravity performance alone is insufficient to establish the transferability of tactile perception for space robotic manipulation, highlighting the need to account for gravity-induced domain shifts during training and validation.
https://arxiv.org/abs/2610.12073
Deep neural networks, including large language models, have achieved remarkable performance across various tasks. However, they are prone to overconfidence during training or fine-tuning. In this work, we observe a consistent phenomenon across different models that the early model is better calibrated, while later training or fine-tuning yields marginal accuracy gains but substantially increases calibration errors. Our analysis suggests that the early model retains uncertainty awareness in both its predictions and features, which is gradually lost with continued training. To avoid training away this uncertainty awareness, we propose \textbf{EUA-Cal}, a novel method that exploits the \textbf{E}arly model as an \textbf{U}ncertainty \textbf{A}nchor for \textbf{Cal}ibration. EUA-Cal introduces early prediction regularization to preserve early predictive uncertainty and prototype structure regularization to exploit uncertainty reflected in the early feature space, jointly mitigating overconfidence. Extensive experiments on image classification and multiple-choice question answering across eight diverse models demonstrate that EUA-Cal outperforms state-of-the-art calibration methods.
https://arxiv.org/abs/2610.12048
Graph neural networks (GNNs) predict molecular properties from chemical graph data, but predictive accuracy does not explain how graph information supports an individual decision. A compact prediction-preserving rationale does not necessarily reveal which changes reverse the decision or which modifications the model tolerates. We propose the Multi-Perspective Graph Explainer (MPGE), unifying factual support, counterfactual sensitivity, and exemplar tolerance for a frozen classifier. The factual view, originally termed prototype (PT), seeks a compact retained edge set with the same label and required confidence. Counterfactual (CF) explanations seek bounded prediction-changing deletions; exemplar (EXE) explanations seek non-trivial bounded deletions that preserve the label and confidence. A shared constrained formulation connects prediction behavior, compactness, and edit cost, while separate objectives generate the three views. Our graph-classification extension of CF-GNNExplainer learns symmetric edge rankings and verifies discrete candidates, recording unsuccessful searches. A separate BBBP fragment backend returns RDKit-sanitized molecules. We evaluate the primary GCN implementation on MUTAG, Mutagenicity, AIDS, COX2_MD, and BBBP using semantic coverage, conditional quality, stability, and runtime. Successful factual masks retained 8.6%--15.5% of input edges on average across datasets; bounded counterfactual coverage was 4.8%--67.6%, and exemplar preservation coverage was 98.9%--100.0%. Exploratory controls reveal the influence of hard projection and retained node information. Quantitative comparisons and molecular visualizations characterize model support, sensitivity, and tolerance without treating them as validated chemical mechanisms.
https://arxiv.org/abs/2610.12039
Abstract argumentation frameworks (AFs) introduced by Dung provide a formal foundation for non-monotonic reasoning in artificial intelligence. While decision problems for general infinite AFs typically reside at high levels of the analytical hierarchy ($\Sigma_1^1$ or $\Pi_1^1$), restricting the framework to be computably finitary reduces some of the complexity to the arithmetical hierarchy. In this paper, we present a complexity mapping of grounded and preferred semantics in computably finitary AFs across standard decision problems: credulous acceptance ($\Cred$), skeptical acceptance ($\Skep$), extension existence ($\Ex$), uniqueness ($\Uni$), and non-empty existence ($\NE$). For grounded semantics, credulous and skeptical acceptance are already known to be $\Sigma_1^0$-complete. We show that non-empty existence is also $\Sigma_1^0$-complete, whereas existence and uniqueness are trivial. These classifications are understood within the domain of valid computably finitary representations. For preferred semantics, using a computably finitely branching computation tree, $\Cred_{\pref}$ is shown to be in $\Pi_1^0$-c and $\NE_{\pref}$ is $\Sigma_2^0$-c. However, it is insufficient to reduce universal quantification and global uniqueness, leaving $\Skep_{\pref}$ in $\Pi_1^1$ and $\UniPref$ in $\Sigma_2^1$-c. Our results show the precise boundary where finitarity succeeds to bring reasoning down to the arithmetical hierarchy and where second-order quantification forces problems back into the analytical hierarchy.
https://arxiv.org/abs/2610.12008
Spin in clinical trials includes reporting practices that distort the presentation of results. This is particularly critical in medicine, where spin is present in more than 50% of randomized controlled trials that fail to reach statistical significance. The comparison of primary and reported outcomes is crucial for detecting several types of spin, including outcome switching. We used 300 pairs of outcomes labeled with semantic similarity to develop a system for automatic detection of outcome switching. We evaluated baseline text similarity models and open-source LLMs using generated similarity scores and the Youden index to determine the classification threshold. The proposed approach involves prompt engineering, classification based on token probabilities, and majority voting for the final decision. The results on the test set of 2,496 examples with an F1 score of 0.78 and an accuracy of 0.90 outperform baseline text similarity models but trail behind fine-tuned versions of BERT. We used LLMs to generate natural language explanations for the classified instances and manually assessed their quality.
https://arxiv.org/abs/2610.11845
The memory capabilities of Large Language Models (LLMs) have garnered increasing attention recently. Despite great success achieved, existing retrieval-based memory approaches typically overlook the differences between memories and employ a unified strategy to process all memories, leading to suboptimal performance. Thus, an intuitive question arises: can we categorize memory into different types and select appropriate strategies? However, given the topic-rich, scenario-complex, and boundary-blurred nature of memory scenarios, achieving precise classification of memories is not easy. To address this challenge, we propose a memory multi-class dataset in this paper, termed TriMEM, which provides precise annotations for memory types across diverse scenarios. Building upon this foundation, we propose a novel memory framework, named MemoType, which can adaptively recognize each memory and query type with the learned router model. With the memory and query routing, MemoType can retrieve the memory with corresponding query types and design tailored retrieval strategies, thereby enhancing the retrieval performance. Moreover, we theoretically prove that any single retrieval strategy is subject to a fundamental upper bound on its expected retrieval precision in multi-class corpora, leading to systematic precision degradation. Extensive experiments on three datasets demonstrate that MemoType consistently outperforms existing methods, achieving up to 16.18% improvement in Recall@1.
https://arxiv.org/abs/2610.11573
DNNs exhibit robustness and generalisation issues not seen in humans. They are also far less data-efficient learners, requiring considerably more training samples to accurately classify novel exemplars. Inductive bias could help with these issues by providing in-built mechanisms to improve generalisation, and hence, reduce reliance on learning from data. We incorporate a biologically-inspired inductive bias into a new activation function, HAND (Homeostasis, Accelerating Nonlinearity, and Divisive-nomalisation), and show its effectiveness with CNNs trained on image classification. Using HAND a ConvNeXt-tiny required 25 training epochs to reach the same accuracy on ImageNet1k as the unmodified model achieved after 200 epochs. Consistent with the effects of an inductive bias, the performance gap reduced with training time and increased data augmentation. When the volume of training data was reduced and unevenly distributed between classes (Long-tailed ImageNet) the improvements in accuracy were even larger and did not reduce with increased training time. Generalisation performance with the common-corruptions data, and the ability to reject samples from unknown classes, were unaffected or improved by HAND. Results generalised across CNN architectures and training data-sets. HAND can, therefore, reduce the required training time and/or the required volume and variety of training data, helping to improve sample efficiency.
https://arxiv.org/abs/2610.11534
Prototypes in classification models are almost always vectors, and a vector has no readable form. This paper asks what happens when a prototype is an image. Documents give the question a natural form, because a document can be rendered as a multi-channel image in which every token becomes a pixel, so a class representative can take the same shape and the same channel semantics as the inputs it stands for. ProtoSemImage represents each class by one or more visual archetypes: prototype images in a four-channel HSV space whose channels carry named linguistic factors. A Skip-Gram objective learns that color space end to end through a four-dimensional bottleneck, discourse boundary rows become differentiable typed difference rows, and classification reduces to 2D visual template matching: a deformable row alignment between a document image and the archetype bank, in the spirit of dynamic time warping. Because the match is a spatial pattern comparison rather than a linear readout, the model reports where an input departs from its archetype and along which channel, and a generative head decodes each archetype back into text. The image representation works: it beats an otherwise identical model with vector prototypes in all three paired seeds, by between 4.3 and 11.8 points on a ten-class task. The distance-based matching does not. A diagnostic that keeps the representation fixed and swaps only the classifier recovers the sequence baselines, which locates a 20.6-point shortfall in the matching rather than in the color compression, and a benchmark built so that a pair of documents shares a bag of words and differs only in arrangement confirms the layout-preservation it was designed for. We report both directions, because for a representation whose whole purpose is inspect ability, the failure modes are as informative as the gains.
https://arxiv.org/abs/2610.11460
System One models output calibrated probabilities over typed answers such as categorical choices, ordinal levels, or binary outcomes, via a non-generative interface. Software can act on these probabilities through thresholds, cost-weighted choices, and escalation rules. Consequently, if these probabilities are miscalibrated or wording-sensitive, the software ma take unintended actions leaving human operators with no textual rationale to inspect. Current evaluations largely report accuracy and calibration on public classification datasets without a clear reference. We present TypedBench, a benchmark for typed decision models like Jev built from seven policy-labelled generators and nine evaluation suites. We report accuracy as median and range across paraphrases, and calibration error relative to the finite-sample noise floor of a matched, perfectly calibrated predictor. We assess probability quality through selective prediction, ordinal proper scoring rules, and realised cost under asymmetric cost matrices. We evaluate a hosted model, an open encoder, and a family of open decoders spanning 0.8B-9B parameters on identical items. The hosted model follows the stated policy but is wording-sensitive and systematically underconfident; under asymmetric costs, using its probabilities can be worse than taking its top answer. Decoders route exactly and are slow as options or questions are added. The decoder is least accurate on policy questions and degrades with more options. Overall, typed decision models must be evaluated jointly on policy adherence, wording robustness, probability quality, and induced decision outcomes.
https://arxiv.org/abs/2610.11392
CLIP serves as a foundational vision-language model and the de facto vision encoder for downstream VLMs such as LLaVA. Post-training offers a lightweight route to refine CLIP, but recent work argues that the standard contrastive loss is unsuitable for post-training due to catastrophic forgetting under small batches, motivating designs that abandon the contrastive objective in favor of distillation. We revisit this premise and find that, for the InfoNCE objective, the reported forgetting is driven primarily not by insufficient negatives but by an inappropriate magnitude of the contrastive temperature $\tau$: with $\tau$ set sufficiently small, contrastive post-training improves rather than degrades the pretrained CLIP, which we explain through the temperature dependence of the InfoNCE gradient. Building on this finding, we propose \textbf{ComCLIP}, a lightweight single-epoch post-training recipe that freezes CLIP's text encoder---so the refined vision encoder is a drop-in replacement with unchanged architecture and inference cost---and trains the vision encoder with a properly-tempered contrastive loss, an MSE anchoring loss against the original CLIP, and a relational distillation loss from DINOv2. Over multiple seeds, ComCLIP matches the self-distillation baseline CLIP-Refine on zero-shot classification while significantly improving the transferability of visual features, measured by linear probing ($48.99$ vs.\ $42.28$ on ViT-B/16), and on ViT-L/14 it also improves MMVP over CLIP-Refine ($24.20$ vs.\ $19.01$); CLIP-Refine remains stronger on image-text retrieval. Used as a drop-in vision encoder for LLaVA-1.5-7B without re-aligning the projector or LLM, ComCLIP yields no net change across $8$ VLM benchmarks, i.e., the refinement does not break downstream compatibility. Code and models are available at this https URL.
https://arxiv.org/abs/2610.11374
Pathology vision-language models (VLMs) have shown strong visual perception ability, but their robustness in the language domain remains poorly characterized. Existing pathology VLM benchmarks largely rely on canonical closed-set prompts or perturb only generic templates, treating language as a fixed evaluation component rather than a variable axis of model behavior. In clinical practice, however, diagnostic language varies across reports, institutions, and candidate diagnoses. We introduce PathLang, a language-centered and clinically grounded zero-shot benchmark. PathLang holds the underlying slides, ground-truth labels, and image-text evaluation direction fixed while systematically varying only the diagnostic language, so that performance differences reflect how a diagnosis is phrased rather than what is imaged. The language variation follows how pathologists actually rephrase diagnoses (terminology, specificity, and reporting style), and all prompts and candidate pools are validated by six board-certified pathologists. PathLang covers four task families: (1) zero-shot classification with image-text alignment analysis, (2) cross-modal retrieval, (3) paraphrase robustness, including semantic-equivalence paraphrases, length and reporting-style variation, and prompt ensembling, and (4) open-vocabulary diagnosis retrieval over four candidate pools with distinct forms of semantic competition. Across nine VLMs and five public datasets spanning four organs, we find that performance is highly sensitive to clinically equivalent paraphrases, varies substantially across forms of semantic competition, and that image-text alignment quality does not necessarily translate into inter-class separability. We release the prompt corpus, candidate pools, pre-computed text embeddings, and evaluation code at this https URL.
https://arxiv.org/abs/2610.11329
Different optimizers can fit the same training data while selecting classifiers with substantially different geometries, but whether this difference provably affects population performance remains unclear. We show that row-wise normalization can achieve strictly higher population accuracy than full-batch Adam, a proxy for random-reshuffling Adam, and exact-SVD Muon in high-dimensional multiclass classification. Under an isotropic Gaussian-cloud data model, this advantage arises because row normalization's class-wise Euclidean geometry asymptotically preserves the population decision-boundary directions, whereas Adam's coordinate-wise geometry and Muon's spectral geometry introduce nonvanishing distortions. Beyond isotropy, the advantage persists for full-batch training on class means with independently oriented class-mean and test-noise covariances. It holds for power-law spectra with class-mean exponent below one, even under heavily anisotropic test noise. When both covariances are diagonal and sufficiently close, the advantage over Adam can reverse, while applying the same random rotation to both restores it by changing only their alignment with Adam's coordinate axes. Synthetic and last-layer language-model experiments support the predicted advantage.
https://arxiv.org/abs/2610.11309
Vertical-domain few-shot classification remains challenging for small language models, as limited supervision makes it difficult to acquire domain-specific decision knowledge. On-Policy Distillation (OPD) can improve teacher-guided adaptation by supervising student-generated rollouts, while GRPO-based reinforcement learning can further refine downstream predictions. However, existing KD-to-RL pipelines typically rely on globally fixed transition schedules, ignoring that different samples may require different amounts of teacher-guided acquisition before reward-driven refinement. We propose PIVOT (Perplexity-Informed Transition Optimization), a dynamic transition framework that routes samples between OPD and GRPO according to teacher-evaluated sequence perplexity. PIVOT moves low-perplexity samples to GRPO for reward-driven refinement while keeping high-perplexity samples under OPD for continued domain knowledge acquisition. Experiments on Banking77 and HWU64 show that PIVOT consistently outperforms continued OPD and globally synchronized OPD$\rightarrow$GRPO baselines under the same number of post-warm-up student optimization steps, achieving stronger downstream performance and more stable training dynamics.
https://arxiv.org/abs/2610.11167
Fine-grained visual classification requires models to recognize subtle local traits while exposing the visual evidence behind their predictions. Class-specific attention pathways provide a natural basis for interpretable recognition, but their constrained prediction structure limits discriminative capacity and underuses intermediate representations from strong pretrained backbones. To address this problem, we propose CARE, a constrained attention refinement framework for interpretable fine-grained recognition via teacher-student distillation. CARE keeps the final prediction and explanation within a class-specific attention student, while introducing a training-only auxiliary query teacher that reads selected intermediate DINOv2 layers with learnable queries. The teacher fuses multi-level representations and transfers logit-standardized class-discriminative knowledge to the student. To further refine the explanation pathway, we design diversity and sparsity terms to regularize student attention heads, reducing redundancy and encouraging compact trait localization. Experiments on CUB, Oxford-IIIT Pet, Stanford Dogs, and Stanford Cars show that CARE achieves strong classification performance under an interpretable frozen-backbone setting, reaching 78.5% Top-1 accuracy on CUB. Faithfulness analysis with insertion and deletion metrics further indicates that the top-ranked attention regions retain class-relevant evidence for explanation.
https://arxiv.org/abs/2610.11153